Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm28179-201ENSMUST00000188365 613 ntBASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.25□□□□□ -0.61
Col4a6B1AVK5 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm4865-201ENSMUST00000196284 1309 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm5865-201ENSMUST00000198713 637 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm34248-201ENSMUST00000200027 474 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm22751-201ENSMUST00000102077 109 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Mir692-3-201ENSMUST00000102079 109 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Mir692-2-201ENSMUST00000102081 109 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm24470-201ENSMUST00000104486 132 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm29157-201ENSMUST00000188753 612 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm44908-201ENSMUST00000208610 266 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Mir341-201ENSMUST00000093593 96 ntBASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.24□□□□□ -0.61
Col4a6B1AVK5 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.23□□□□□ -0.61
Col4a6B1AVK5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms