Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm13204-201ENSMUST00000120110 821 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gm25677-201ENSMUST00000174983 72 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm16441-201ENSMUST00000138176 924 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm6038-201ENSMUST00000154310 948 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm27316-201ENSMUST00000184884 277 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm37197-201ENSMUST00000195607 401 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm45094-201ENSMUST00000207013 617 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scn3aA2ASI5 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm16518-201ENSMUST00000117960 508 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm24074-201ENSMUST00000158178 260 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm43097-201ENSMUST00000196867 151 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm7238-201ENSMUST00000206467 973 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm12947-201ENSMUST00000116114 420 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm6425-201ENSMUST00000136332 790 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm28746-201ENSMUST00000187453 380 ntBASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn3aA2ASI5 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms