Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm14644-201ENSMUST00000116671 647 ntBASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm9353-201ENSMUST00000200472 604 ntBASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm9794-201ENSMUST00000202370 423 ntBASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Rps4l-202ENSMUST00000204242 789 ntBASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm5455-201ENSMUST00000058710 715 ntBASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 AC121574.1-201ENSMUST00000228770 3132 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Dido1-205ENSMUST00000103056 4281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm12490-201ENSMUST00000120255 560 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm9230-201ENSMUST00000188228 532 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm6450-201ENSMUST00000200896 574 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm44008-201ENSMUST00000204345 412 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm10312-201ENSMUST00000078515 489 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3a3Q9D554 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms