Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Krt88Q9CPR6 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm15617-201ENSMUST00000118973 771 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm2991-201ENSMUST00000173338 480 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm10807-201ENSMUST00000177134 795 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm8885-201ENSMUST00000189382 598 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm3961-201ENSMUST00000204425 994 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm45113-201ENSMUST00000207518 165 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm32111-201ENSMUST00000207689 846 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm45856-201ENSMUST00000212752 416 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm6722-201ENSMUST00000221586 390 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.04□□□□□ -0.8
Krt88Q9CPR6 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm7584-201ENSMUST00000175829 940 ntBASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Gm5302-201ENSMUST00000202130 796 ntBASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Krt88Q9CPR6 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms