Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Ccdc87Q8CDL9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm8566-201ENSMUST00000120174 465 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Mir1896-201ENSMUST00000122641 81 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm10807-201ENSMUST00000177134 795 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm5733-201ENSMUST00000190232 939 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm1821-202ENSMUST00000227415 750 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc87Q8CDL9 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc87Q8CDL9 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm7851-201ENSMUST00000117574 323 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm11941-201ENSMUST00000119904 610 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm22846-201ENSMUST00000157706 270 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm23699-201ENSMUST00000158835 135 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm20426-201ENSMUST00000173657 440 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm27530-201ENSMUST00000184096 98 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm37246-201ENSMUST00000192665 835 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Gm6905-201ENSMUST00000205729 511 ntBASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc87Q8CDL9 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms