Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Gm37031-201ENSMUST00000195487 2530 ntBASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp44Q8C2S0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Usp44Q8C2S0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Usp44Q8C2S0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm15744-201ENSMUST00000161734 213 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm5210-201ENSMUST00000182150 1010 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Mir6407-201ENSMUST00000184510 101 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm27441-201ENSMUST00000185000 105 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm28746-201ENSMUST00000187453 380 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13□□□□□ -0.33
Usp44Q8C2S0 AC165154.1-201ENSMUST00000226661 340 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm45041-201ENSMUST00000207366 3108 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13□□□□□ -0.33
Usp44Q8C2S0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Gm10699-201ENSMUST00000098916 2130 ntBASIC13□□□□□ -0.33
Usp44Q8C2S0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp44Q8C2S0 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm11573-201ENSMUST00000119956 394 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm13117-201ENSMUST00000120894 691 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm24514-201ENSMUST00000174961 285 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm7255-201ENSMUST00000187371 908 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm6677-201ENSMUST00000195100 441 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Gm7525-201ENSMUST00000219425 454 ntBASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp44Q8C2S0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms