Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Gm38111-201ENSMUST00000194817 2741 ntBASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup98Q6PFD9 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm22495-201ENSMUST00000104492 126 ntBASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm9166-201ENSMUST00000120293 561 ntBASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm11942-201ENSMUST00000180255 345 ntBASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm7627-201ENSMUST00000183205 999 ntBASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Mir8111-201ENSMUST00000184463 137 ntBASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm9515-201ENSMUST00000200276 647 ntBASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.93□□□□□ -0.34
Nup98Q6PFD9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm24279-201ENSMUST00000104236 131 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm25604-201ENSMUST00000158359 133 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm27826-201ENSMUST00000175282 255 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm26943-201ENSMUST00000182295 957 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm29543-201ENSMUST00000188138 967 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Trav11n-201ENSMUST00000200113 343 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm13171-201ENSMUST00000117233 391 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm38349-201ENSMUST00000195732 462 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm42779-201ENSMUST00000198807 406 ntBASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup98Q6PFD9 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup98Q6PFD9 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms