Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm14395-201ENSMUST00000120494 563 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm1848-201ENSMUST00000120711 789 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Mir7076-201ENSMUST00000183519 74 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm37458-201ENSMUST00000194055 410 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm8365-201ENSMUST00000197334 648 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm44551-201ENSMUST00000208804 171 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Gm38271-201ENSMUST00000192296 1603 ntBASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.02□□□□□ -0.32
Smarcc2Q6PDG5 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm24992-201ENSMUST00000157412 130 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm5302-201ENSMUST00000202130 796 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm44545-201ENSMUST00000208262 746 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm2875-201ENSMUST00000211333 360 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smarcc2Q6PDG5 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Gm12516-201ENSMUST00000120819 385 ntBASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.01□□□□□ -0.33
Smarcc2Q6PDG5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms