Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.48□□□□□ -0.41
Usp49Q6P9L4 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.48□□□□□ -0.41
Usp49Q6P9L4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp49Q6P9L4 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp49Q6P9L4 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp49Q6P9L4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp49Q6P9L4 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp49Q6P9L4 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gm14942-201ENSMUST00000119642 336 ntBASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gm14665-201ENSMUST00000122294 557 ntBASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gm15881-201ENSMUST00000148792 942 ntBASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gm44545-201ENSMUST00000208262 746 ntBASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp49Q6P9L4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm11628-201ENSMUST00000117568 171 ntBASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm15131-201ENSMUST00000119124 595 ntBASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm3551-201ENSMUST00000190750 664 ntBASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm43520-201ENSMUST00000197996 164 ntBASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm44980-201ENSMUST00000205826 314 ntBASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp49Q6P9L4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Usp49Q6P9L4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.45□□□□□ -0.42
Usp49Q6P9L4 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms