Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CiitaP79621 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CiitaP79621 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CiitaP79621 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CiitaP79621 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.09□□□□□ -0.47
CiitaP79621 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Gm11628-201ENSMUST00000117568 171 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Platr10-202ENSMUST00000191479 818 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CiitaP79621 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.09□□□□□ -0.47
CiitaP79621 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.09□□□□□ -0.47
CiitaP79621 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.09□□□□□ -0.47
CiitaP79621 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.09□□□□□ -0.47
CiitaP79621 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.09□□□□□ -0.47
CiitaP79621 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.09□□□□□ -0.47
CiitaP79621 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Gm8181-201ENSMUST00000062242 669 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.09□□□□□ -0.47
CiitaP79621 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CiitaP79621 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CiitaP79621 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CiitaP79621 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CiitaP79621 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
CiitaP79621 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CiitaP79621 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CiitaP79621 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CiitaP79621 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CiitaP79621 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CiitaP79621 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.08□□□□□ -0.48
CiitaP79621 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.08□□□□□ -0.48
CiitaP79621 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.08□□□□□ -0.48
CiitaP79621 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.08□□□□□ -0.48
CiitaP79621 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Gm2594-201ENSMUST00000214774 742 ntBASIC12.08□□□□□ -0.48
CiitaP79621 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.08□□□□□ -0.48
CiitaP79621 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.08□□□□□ -0.48
CiitaP79621 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.08□□□□□ -0.48
CiitaP79621 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CiitaP79621 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.08□□□□□ -0.48
CiitaP79621 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CiitaP79621 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CiitaP79621 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CiitaP79621 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CiitaP79621 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CiitaP79621 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CiitaP79621 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CiitaP79621 Gm13019-201ENSMUST00000120000 276 ntBASIC12.07□□□□□ -0.48
CiitaP79621 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.07□□□□□ -0.48
CiitaP79621 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms