Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Lmo4P61969 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Lmo4P61969 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Gm33366-201ENSMUST00000195583 3827 ntBASIC9□□□□□ -0.97
Lmo4P61969 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Lmo4P61969 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC9□□□□□ -0.97
Lmo4P61969 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC9□□□□□ -0.97
Lmo4P61969 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9□□□□□ -0.97
Lmo4P61969 Gm11475-201ENSMUST00000118482 476 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm6758-201ENSMUST00000119643 1055 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC9□□□□□ -0.97
Lmo4P61969 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9□□□□□ -0.97
Lmo4P61969 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Gm23647-201ENSMUST00000175042 109 ntBASIC9□□□□□ -0.97
Lmo4P61969 Rn5s-201ENSMUST00000177555 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s108-201ENSMUST00000177575 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s121-201ENSMUST00000177589 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s146-201ENSMUST00000177889 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm22109-201ENSMUST00000177995 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm22291-201ENSMUST00000178027 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s141-201ENSMUST00000178066 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm23284-201ENSMUST00000178069 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s100-201ENSMUST00000178106 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s111-201ENSMUST00000178203 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s105-201ENSMUST00000178499 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s149-201ENSMUST00000178520 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s103-201ENSMUST00000178755 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s123-201ENSMUST00000178804 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s142-201ENSMUST00000178820 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s144-201ENSMUST00000178859 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s139-201ENSMUST00000178975 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s134-201ENSMUST00000178983 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s136-201ENSMUST00000179080 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm25018-201ENSMUST00000179081 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s104-201ENSMUST00000179107 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s113-201ENSMUST00000179143 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s133-201ENSMUST00000179275 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s117-201ENSMUST00000179431 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm25212-201ENSMUST00000179432 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s138-201ENSMUST00000179476 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s122-201ENSMUST00000179500 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s143-201ENSMUST00000179542 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s107-201ENSMUST00000179704 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm26391-201ENSMUST00000179843 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s110-201ENSMUST00000179995 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s128-201ENSMUST00000180096 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm9507-202ENSMUST00000180157 654 ntBASIC9□□□□□ -0.97
Lmo4P61969 n-R5s124-201ENSMUST00000180334 119 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Gm9916-201ENSMUST00000192943 1228 ntBASIC9□□□□□ -0.97
Lmo4P61969 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Gm7902-201ENSMUST00000198842 947 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Gm43868-201ENSMUST00000205187 2114 ntBASIC9□□□□□ -0.97
Lmo4P61969 Gm33080-201ENSMUST00000205429 172 ntBASIC9□□□□□ -0.97
Lmo4P61969 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 AC140375.1-201ENSMUST00000225421 694 ntBASIC9□□□□□ -0.97
Lmo4P61969 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC9□□□□□ -0.97
Lmo4P61969 Gm24089-201ENSMUST00000093696 109 ntBASIC9□□□□□ -0.97
Lmo4P61969 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms