Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.55□□□□□ -0.72
Nup43P59235 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nup43P59235 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nup43P59235 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Gm25766-201ENSMUST00000104101 131 ntBASIC10.55□□□□□ -0.72
Nup43P59235 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Nup43P59235 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Nup43P59235 Gm11451-201ENSMUST00000118946 630 ntBASIC10.55□□□□□ -0.72
Nup43P59235 Gm12516-201ENSMUST00000120819 385 ntBASIC10.55□□□□□ -0.72
Nup43P59235 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.55□□□□□ -0.72
Nup43P59235 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.55□□□□□ -0.72
Nup43P59235 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nup43P59235 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.55□□□□□ -0.72
Nup43P59235 Gm18351-201ENSMUST00000188646 883 ntBASIC10.55□□□□□ -0.72
Nup43P59235 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.55□□□□□ -0.72
Nup43P59235 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Nup43P59235 Gm44329-201ENSMUST00000197469 112 ntBASIC10.55□□□□□ -0.72
Nup43P59235 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.55□□□□□ -0.72
Nup43P59235 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.55□□□□□ -0.72
Nup43P59235 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.55□□□□□ -0.72
Nup43P59235 Gm35638-201ENSMUST00000220724 652 ntBASIC10.55□□□□□ -0.72
Nup43P59235 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.55□□□□□ -0.72
Nup43P59235 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nup43P59235 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nup43P59235 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.55□□□□□ -0.72
Nup43P59235 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Nup43P59235 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.55□□□□□ -0.72
Nup43P59235 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nup43P59235 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.54□□□□□ -0.72
Nup43P59235 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.54□□□□□ -0.72
Nup43P59235 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Gm9133-201ENSMUST00000118289 540 ntBASIC10.54□□□□□ -0.72
Nup43P59235 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Nup43P59235 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup43P59235 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.54□□□□□ -0.72
Nup43P59235 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.54□□□□□ -0.72
Nup43P59235 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup43P59235 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup43P59235 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup43P59235 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.54□□□□□ -0.72
Nup43P59235 Gm5599-201ENSMUST00000209602 788 ntBASIC10.54□□□□□ -0.72
Nup43P59235 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup43P59235 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.54□□□□□ -0.72
Nup43P59235 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.54□□□□□ -0.72
Nup43P59235 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup43P59235 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms