Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx2-2P42586 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm25766-201ENSMUST00000104101 131 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm15197-201ENSMUST00000120526 478 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm37301-201ENSMUST00000195412 568 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm43947-201ENSMUST00000203019 959 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm45550-201ENSMUST00000209380 946 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Gm10179-201ENSMUST00000086233 688 ntBASIC10.2□□□□□ -0.78
Nkx2-2P42586 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-2P42586 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm2875-201ENSMUST00000211333 360 ntBASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm45770-201ENSMUST00000212105 616 ntBASIC10.19□□□□□ -0.78
Nkx2-2P42586 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.19□□□□□ -0.78
Nkx2-2P42586 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.19□□□□□ -0.78
Nkx2-2P42586 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nkx2-2P42586 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms