Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Chd1P40201 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Chd1P40201 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd1P40201 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chd1P40201 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Chd1P40201 Gm22582-201ENSMUST00000102283 94 ntBASIC16.34■□□□□ 0.21
Chd1P40201 Gm25723-201ENSMUST00000104530 126 ntBASIC16.34■□□□□ 0.21
Chd1P40201 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Chd1P40201 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Gm37261-201ENSMUST00000194360 1101 ntBASIC16.34■□□□□ 0.21
Chd1P40201 Gm3198-201ENSMUST00000208725 1026 ntBASIC16.34■□□□□ 0.21
Chd1P40201 Gm39481-201ENSMUST00000210379 512 ntBASIC16.34■□□□□ 0.21
Chd1P40201 AC155293.1-201ENSMUST00000219793 1026 ntBASIC16.34■□□□□ 0.21
Chd1P40201 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chd1P40201 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.34■□□□□ 0.21
Chd1P40201 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC16.34■□□□□ 0.21
Chd1P40201 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.34■□□□□ 0.21
Chd1P40201 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chd1P40201 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chd1P40201 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.34■□□□□ 0.21
Chd1P40201 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd1P40201 Gm25561-201ENSMUST00000104607 125 ntBASIC16.33■□□□□ 0.21
Chd1P40201 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chd1P40201 Gm7847-201ENSMUST00000151645 777 ntBASIC16.33■□□□□ 0.21
Chd1P40201 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC16.33■□□□□ 0.21
Chd1P40201 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC16.33■□□□□ 0.21
Chd1P40201 Pea15b-202ENSMUST00000183185 555 ntBASIC16.33■□□□□ 0.21
Chd1P40201 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chd1P40201 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC16.33■□□□□ 0.21
Chd1P40201 Gm18857-201ENSMUST00000210421 901 ntBASIC16.33■□□□□ 0.21
Chd1P40201 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd1P40201 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Chd1P40201 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd1P40201 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC16.33■□□□□ 0.21
Chd1P40201 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd1P40201 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Chd1P40201 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Gm27177-202ENSMUST00000183514 2703 ntBASIC16.33■□□□□ 0.2
Chd1P40201 Gm8848-201ENSMUST00000197270 1343 ntBASIC16.33■□□□□ 0.2
Chd1P40201 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Chd1P40201 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Gm6500-201ENSMUST00000119412 451 ntBASIC16.33■□□□□ 0.2
Chd1P40201 Gm12529-201ENSMUST00000119529 268 ntBASIC16.33■□□□□ 0.2
Chd1P40201 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Gm8488-201ENSMUST00000176112 1280 ntBASIC16.33■□□□□ 0.2
Chd1P40201 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Chd1P40201 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Gm6463-201ENSMUST00000182090 966 ntBASIC16.33■□□□□ 0.2
Chd1P40201 AC170810.2-201ENSMUST00000228384 1232 ntBASIC16.33■□□□□ 0.2
Chd1P40201 Gm10250-201ENSMUST00000090488 482 ntBASIC16.33■□□□□ 0.2
Chd1P40201 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chd1P40201 Gm43625-201ENSMUST00000199177 1539 ntBASIC16.33■□□□□ 0.2
Chd1P40201 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd1P40201 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 AC154575.1-201ENSMUST00000227166 1474 ntBASIC16.32■□□□□ 0.2
Chd1P40201 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd1P40201 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms