Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm25148-201ENSMUST00000104611 123 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm13668-201ENSMUST00000119237 1001 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm11675-201ENSMUST00000121873 832 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm43163-201ENSMUST00000196571 442 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm43058-201ENSMUST00000197645 625 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm3793-201ENSMUST00000204973 672 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm18561-201ENSMUST00000206027 804 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm30671-201ENSMUST00000214898 318 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm9873-201ENSMUST00000063891 1097 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm16397-201ENSMUST00000122201 494 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm21778-201ENSMUST00000178779 471 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm17798-201ENSMUST00000182282 1035 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm3619-201ENSMUST00000219947 775 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC9.38□□□□□ -0.91
Hoxa3P02831 Gm6722-201ENSMUST00000221586 390 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.38□□□□□ -0.91
Hoxa3P02831 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms