Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pknox1O70477 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm5302-201ENSMUST00000202130 796 ntBASIC11.07□□□□□ -0.64
Pknox1O70477 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.07□□□□□ -0.64
Pknox1O70477 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.07□□□□□ -0.64
Pknox1O70477 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.07□□□□□ -0.64
Pknox1O70477 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.07□□□□□ -0.64
Pknox1O70477 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.07□□□□□ -0.64
Pknox1O70477 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pknox1O70477 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pknox1O70477 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.06□□□□□ -0.64
Pknox1O70477 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pknox1O70477 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm11244-201ENSMUST00000121243 237 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Gm9089-201ENSMUST00000122027 526 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.06□□□□□ -0.64
Pknox1O70477 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pknox1O70477 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Pknox1O70477 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pknox1O70477 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pknox1O70477 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pknox1O70477 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm2383-201ENSMUST00000181461 807 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Gm2517-201ENSMUST00000215651 348 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.06□□□□□ -0.64
Pknox1O70477 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pknox1O70477 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pknox1O70477 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pknox1O70477 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.06□□□□□ -0.64
Pknox1O70477 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pknox1O70477 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pknox1O70477 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pknox1O70477 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pknox1O70477 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pknox1O70477 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms