Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Tcof1O08784 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tcof1O08784 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tcof1O08784 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.06□□□□□ -0.32
Tcof1O08784 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.06□□□□□ -0.32
Tcof1O08784 Gm11801-201ENSMUST00000117807 746 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Gm12463-201ENSMUST00000118271 849 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Gm12274-201ENSMUST00000120062 385 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.06□□□□□ -0.32
Tcof1O08784 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Uba52-ps-201ENSMUST00000183770 379 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.06□□□□□ -0.32
Tcof1O08784 Gm18776-201ENSMUST00000188833 654 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.06□□□□□ -0.32
Tcof1O08784 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tcof1O08784 Gm25580-201ENSMUST00000083409 327 ntBASIC13.06□□□□□ -0.32
Tcof1O08784 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.06□□□□□ -0.32
Tcof1O08784 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.06□□□□□ -0.32
Tcof1O08784 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tcof1O08784 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tcof1O08784 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.05□□□□□ -0.32
Tcof1O08784 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.05□□□□□ -0.32
Tcof1O08784 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Gm14270-201ENSMUST00000118388 846 ntBASIC13.05□□□□□ -0.32
Tcof1O08784 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.05□□□□□ -0.32
Tcof1O08784 Gm9673-201ENSMUST00000119287 781 ntBASIC13.05□□□□□ -0.32
Tcof1O08784 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Tcof1O08784 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.05□□□□□ -0.32
Tcof1O08784 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.05□□□□□ -0.32
Tcof1O08784 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Tcof1O08784 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Tcof1O08784 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Tcof1O08784 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tcof1O08784 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcof1O08784 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tcof1O08784 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tcof1O08784 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.04□□□□□ -0.32
Tcof1O08784 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.04□□□□□ -0.32
Tcof1O08784 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.04□□□□□ -0.32
Tcof1O08784 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tcof1O08784 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tcof1O08784 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcof1O08784 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms