Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Gm8320-201ENSMUST00000177584 1762 ntBASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Gm8303-201ENSMUST00000178371 1762 ntBASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Gm8331-201ENSMUST00000178433 1762 ntBASIC8.96□□□□□ -0.97
Gm12887B1AVM1 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.97
Gm12887B1AVM1 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm27514-201ENSMUST00000183692 110 ntBASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm27441-201ENSMUST00000185000 105 ntBASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm37489-201ENSMUST00000191883 159 ntBASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm38228-201ENSMUST00000193169 1293 ntBASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm45691-201ENSMUST00000206905 1120 ntBASIC8.96□□□□□ -0.98
Gm12887B1AVM1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 AC113082.1-201ENSMUST00000217324 327 ntBASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm7046-201ENSMUST00000221351 977 ntBASIC8.96□□□□□ -0.98
Gm12887B1AVM1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Gm12887B1AVM1 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm7742-201ENSMUST00000167648 1527 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm7732-201ENSMUST00000170486 1527 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm7740-201ENSMUST00000186171 1527 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm7736-201ENSMUST00000096981 1527 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm5380-201ENSMUST00000119296 2136 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm23270-201ENSMUST00000104055 131 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Olfml3-204ENSMUST00000169286 874 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm5745-201ENSMUST00000183748 313 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm5302-201ENSMUST00000202130 796 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm42867-201ENSMUST00000202995 469 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm4157-201ENSMUST00000211647 679 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm45856-201ENSMUST00000212752 416 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm43307-201ENSMUST00000199465 2371 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Gm15163-201ENSMUST00000120749 1302 ntBASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Gm12887B1AVM1 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms