Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom3Q9QXN0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom3Q9QXN0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Shroom3Q9QXN0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shroom3Q9QXN0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Shroom3Q9QXN0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shroom3Q9QXN0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shroom3Q9QXN0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.33■□□□□ 0.85
Shroom3Q9QXN0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.33■□□□□ 0.84
Shroom3Q9QXN0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.33■□□□□ 0.84
Shroom3Q9QXN0 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.33■□□□□ 0.84
Shroom3Q9QXN0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Shroom3Q9QXN0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom3Q9QXN0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom3Q9QXN0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom3Q9QXN0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom3Q9QXN0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Shroom3Q9QXN0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom3Q9QXN0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Gm43530-201ENSMUST00000195920 274 ntBASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shroom3Q9QXN0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom3Q9QXN0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom3Q9QXN0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.29■□□□□ 0.84
Shroom3Q9QXN0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom3Q9QXN0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom3Q9QXN0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom3Q9QXN0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom3Q9QXN0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom3Q9QXN0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom3Q9QXN0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom3Q9QXN0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom3Q9QXN0 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.28■□□□□ 0.84
Shroom3Q9QXN0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom3Q9QXN0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom3Q9QXN0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.28■□□□□ 0.84
Shroom3Q9QXN0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Shroom3Q9QXN0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Shroom3Q9QXN0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom3Q9QXN0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.27■□□□□ 0.84
Shroom3Q9QXN0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom3Q9QXN0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Shroom3Q9QXN0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom3Q9QXN0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shroom3Q9QXN0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shroom3Q9QXN0 Gm18284-201ENSMUST00000172604 624 ntBASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms