Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.11■□□□□ 0.49
Sec61a2Q9JLR1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.11■□□□□ 0.49
Sec61a2Q9JLR1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a2Q9JLR1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a2Q9JLR1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Sec61a2Q9JLR1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sec61a2Q9JLR1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a2Q9JLR1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a2Q9JLR1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a2Q9JLR1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a2Q9JLR1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sec61a2Q9JLR1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a2Q9JLR1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a2Q9JLR1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a2Q9JLR1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sec61a2Q9JLR1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a2Q9JLR1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a2Q9JLR1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a2Q9JLR1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a2Q9JLR1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a2Q9JLR1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.08■□□□□ 0.48
Sec61a2Q9JLR1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a2Q9JLR1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a2Q9JLR1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a2Q9JLR1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sec61a2Q9JLR1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sec61a2Q9JLR1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.07■□□□□ 0.48
Sec61a2Q9JLR1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sec61a2Q9JLR1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.07■□□□□ 0.48
Sec61a2Q9JLR1 Gm7417-201ENSMUST00000192950 473 ntBASIC18.07■□□□□ 0.48
Sec61a2Q9JLR1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sec61a2Q9JLR1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.06■□□□□ 0.48
Sec61a2Q9JLR1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a2Q9JLR1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Sec61a2Q9JLR1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a2Q9JLR1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a2Q9JLR1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.05■□□□□ 0.48
Sec61a2Q9JLR1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a2Q9JLR1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a2Q9JLR1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sec61a2Q9JLR1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sec61a2Q9JLR1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sec61a2Q9JLR1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sec61a2Q9JLR1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Sec61a2Q9JLR1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a2Q9JLR1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms