Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Vps35Q9EQH3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vps35Q9EQH3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Vps35Q9EQH3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps35Q9EQH3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vps35Q9EQH3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Vps35Q9EQH3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps35Q9EQH3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps35Q9EQH3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vps35Q9EQH3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps35Q9EQH3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps35Q9EQH3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps35Q9EQH3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Vps35Q9EQH3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps35Q9EQH3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps35Q9EQH3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Gm9847-201ENSMUST00000052528 599 ntBASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps35Q9EQH3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps35Q9EQH3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Golgb1-201ENSMUST00000023534 498 ntBASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vps35Q9EQH3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps35Q9EQH3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Vps35Q9EQH3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Vps35Q9EQH3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps35Q9EQH3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.09■□□□□ 0.81
Vps35Q9EQH3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Vps35Q9EQH3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps35Q9EQH3 Gm13241-201ENSMUST00000094493 780 ntBASIC20.09■□□□□ 0.81
Vps35Q9EQH3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps35Q9EQH3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps35Q9EQH3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vps35Q9EQH3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.08■□□□□ 0.81
Vps35Q9EQH3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.08■□□□□ 0.81
Vps35Q9EQH3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms