Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Gm15039-201ENSMUST00000118914 875 ntBASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rita1Q9D1H0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rita1Q9D1H0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rita1Q9D1H0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rita1Q9D1H0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rita1Q9D1H0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.68■□□□□ 0.58
Rita1Q9D1H0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rita1Q9D1H0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rita1Q9D1H0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rita1Q9D1H0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Gm12251-201ENSMUST00000117893 792 ntBASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rita1Q9D1H0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rita1Q9D1H0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rita1Q9D1H0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rita1Q9D1H0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rita1Q9D1H0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rita1Q9D1H0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rita1Q9D1H0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rita1Q9D1H0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rita1Q9D1H0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rita1Q9D1H0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rita1Q9D1H0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rita1Q9D1H0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rita1Q9D1H0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Mir7075-201ENSMUST00000184187 82 ntBASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.62■□□□□ 0.57
Rita1Q9D1H0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rita1Q9D1H0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rita1Q9D1H0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rita1Q9D1H0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rita1Q9D1H0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rita1Q9D1H0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms