Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cthrc1Q9D1D6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cthrc1Q9D1D6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cthrc1Q9D1D6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Gm43530-201ENSMUST00000195920 274 ntBASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cthrc1Q9D1D6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cthrc1Q9D1D6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cthrc1Q9D1D6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cthrc1Q9D1D6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.79■□□□□ 0.6
Cthrc1Q9D1D6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.79■□□□□ 0.6
Cthrc1Q9D1D6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.79■□□□□ 0.6
Cthrc1Q9D1D6 Golgb1-201ENSMUST00000023534 498 ntBASIC18.79■□□□□ 0.6
Cthrc1Q9D1D6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cthrc1Q9D1D6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Iqck-206ENSMUST00000208658 2891 ntBASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cthrc1Q9D1D6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cthrc1Q9D1D6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cthrc1Q9D1D6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cthrc1Q9D1D6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms