Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Gm14523-201ENSMUST00000117260 558 ntBASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.96■□□□□ 0.63
Chaf1bQ9D0N7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1bQ9D0N7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.94■□□□□ 0.62
Chaf1bQ9D0N7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chaf1bQ9D0N7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1bQ9D0N7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1bQ9D0N7 Gm7332-201ENSMUST00000118351 454 ntBASIC18.92■□□□□ 0.62
Chaf1bQ9D0N7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1bQ9D0N7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1bQ9D0N7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chaf1bQ9D0N7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chaf1bQ9D0N7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chaf1bQ9D0N7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1bQ9D0N7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Chaf1bQ9D0N7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1bQ9D0N7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1bQ9D0N7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chaf1bQ9D0N7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.9■□□□□ 0.62
Chaf1bQ9D0N7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.89■□□□□ 0.61
Chaf1bQ9D0N7 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.89■□□□□ 0.61
Chaf1bQ9D0N7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1bQ9D0N7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chaf1bQ9D0N7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Chaf1bQ9D0N7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1bQ9D0N7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1bQ9D0N7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1bQ9D0N7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1bQ9D0N7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1bQ9D0N7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.88■□□□□ 0.61
Chaf1bQ9D0N7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chaf1bQ9D0N7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1bQ9D0N7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.87■□□□□ 0.61
Chaf1bQ9D0N7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1bQ9D0N7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1bQ9D0N7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1bQ9D0N7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1bQ9D0N7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms