Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim13Q9CYB0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim13Q9CYB0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.61■□□□□ 0.57
Trim13Q9CYB0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim13Q9CYB0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim13Q9CYB0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim13Q9CYB0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim13Q9CYB0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim13Q9CYB0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.58■□□□□ 0.57
Trim13Q9CYB0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.58■□□□□ 0.57
Trim13Q9CYB0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim13Q9CYB0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim13Q9CYB0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim13Q9CYB0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim13Q9CYB0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim13Q9CYB0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim13Q9CYB0 Gm14523-201ENSMUST00000117260 558 ntBASIC18.58■□□□□ 0.56
Trim13Q9CYB0 Gm27502-201ENSMUST00000183495 199 ntBASIC18.58■□□□□ 0.56
Trim13Q9CYB0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim13Q9CYB0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.58■□□□□ 0.56
Trim13Q9CYB0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim13Q9CYB0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim13Q9CYB0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim13Q9CYB0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim13Q9CYB0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trim13Q9CYB0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim13Q9CYB0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.56■□□□□ 0.56
Trim13Q9CYB0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Cap2-205ENSMUST00000225824 1634 ntBASIC18.56■□□□□ 0.56
Trim13Q9CYB0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim13Q9CYB0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Gm12366-201ENSMUST00000121722 873 ntBASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms