Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Otud1Q9CUB6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.14■□□□□ 0.65
Otud1Q9CUB6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Otud1Q9CUB6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.13■□□□□ 0.65
Otud1Q9CUB6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.13■□□□□ 0.65
Otud1Q9CUB6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.13■□□□□ 0.65
Otud1Q9CUB6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Otud1Q9CUB6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Otud1Q9CUB6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.13■□□□□ 0.65
Otud1Q9CUB6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Otud1Q9CUB6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Otud1Q9CUB6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Otud1Q9CUB6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Otud1Q9CUB6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Otud1Q9CUB6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Otud1Q9CUB6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Otud1Q9CUB6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.12■□□□□ 0.65
Otud1Q9CUB6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Otud1Q9CUB6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Otud1Q9CUB6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Otud1Q9CUB6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Otud1Q9CUB6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Otud1Q9CUB6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Otud1Q9CUB6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.08■□□□□ 0.65
Otud1Q9CUB6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Otud1Q9CUB6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.08■□□□□ 0.64
Otud1Q9CUB6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Otud1Q9CUB6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 Mir7075-201ENSMUST00000184187 82 ntBASIC19.07■□□□□ 0.64
Otud1Q9CUB6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Otud1Q9CUB6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Otud1Q9CUB6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Otud1Q9CUB6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Otud1Q9CUB6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Otud1Q9CUB6 Gm12251-201ENSMUST00000117893 792 ntBASIC19.06■□□□□ 0.64
Otud1Q9CUB6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.06■□□□□ 0.64
Otud1Q9CUB6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.06■□□□□ 0.64
Otud1Q9CUB6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Otud1Q9CUB6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.06■□□□□ 0.64
Otud1Q9CUB6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Gm6139-201ENSMUST00000079261 882 ntBASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Otud1Q9CUB6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Otud1Q9CUB6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Otud1Q9CUB6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Otud1Q9CUB6 Serp2-204ENSMUST00000228055 705 ntBASIC19.04■□□□□ 0.64
Otud1Q9CUB6 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.04■□□□□ 0.64
Otud1Q9CUB6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Otud1Q9CUB6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Otud1Q9CUB6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
Otud1Q9CUB6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms