Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm4968-201ENSMUST00000071458 858 ntBASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.58■■□□□ 1.37
Pcdh15Q99PJ1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Pcdh15Q99PJ1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.58■■□□□ 1.37
Pcdh15Q99PJ1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23.58■■□□□ 1.37
Pcdh15Q99PJ1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdh15Q99PJ1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.57■■□□□ 1.36
Pcdh15Q99PJ1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
Pcdh15Q99PJ1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.57■■□□□ 1.36
Pcdh15Q99PJ1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.57■■□□□ 1.36
Pcdh15Q99PJ1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh15Q99PJ1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh15Q99PJ1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh15Q99PJ1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh15Q99PJ1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh15Q99PJ1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh15Q99PJ1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh15Q99PJ1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh15Q99PJ1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh15Q99PJ1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 Gm13148-201ENSMUST00000118892 745 ntBASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh15Q99PJ1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdh15Q99PJ1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdh15Q99PJ1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Pcdh15Q99PJ1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdh15Q99PJ1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.53■■□□□ 1.36
Pcdh15Q99PJ1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.52■■□□□ 1.36
Pcdh15Q99PJ1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh15Q99PJ1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Pcdh15Q99PJ1 Gm27801-201ENSMUST00000184174 223 ntBASIC23.52■■□□□ 1.36
Pcdh15Q99PJ1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh15Q99PJ1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh15Q99PJ1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh15Q99PJ1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdh15Q99PJ1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdh15Q99PJ1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdh15Q99PJ1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.51■■□□□ 1.35
Pcdh15Q99PJ1 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.51■■□□□ 1.35
Pcdh15Q99PJ1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Pcdh15Q99PJ1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh15Q99PJ1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh15Q99PJ1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Pcdh15Q99PJ1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.5■■□□□ 1.35
Pcdh15Q99PJ1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC23.5■■□□□ 1.35
Pcdh15Q99PJ1 Gm10252-201ENSMUST00000209541 832 ntBASIC23.5■■□□□ 1.35
Pcdh15Q99PJ1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh15Q99PJ1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh15Q99PJ1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
Pcdh15Q99PJ1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh15Q99PJ1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh15Q99PJ1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh15Q99PJ1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh15Q99PJ1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdh15Q99PJ1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh15Q99PJ1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh15Q99PJ1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Gm12527-201ENSMUST00000117967 564 ntBASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh15Q99PJ1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdh15Q99PJ1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdh15Q99PJ1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.46■■□□□ 1.35
Pcdh15Q99PJ1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms