Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cdh23Q99PF4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh23Q99PF4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh23Q99PF4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Reep4-203ENSMUST00000226563 1444 ntBASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh23Q99PF4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.06■□□□□ 0.96
Cdh23Q99PF4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh23Q99PF4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Cdh23Q99PF4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Gm12441-201ENSMUST00000121806 588 ntBASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Cdh23Q99PF4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh23Q99PF4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.02■□□□□ 0.96
Cdh23Q99PF4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Cdh23Q99PF4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cdh23Q99PF4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cdh23Q99PF4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh23Q99PF4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh23Q99PF4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh23Q99PF4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh23Q99PF4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh23Q99PF4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh23Q99PF4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdh23Q99PF4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdh23Q99PF4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21■□□□□ 0.95
Cdh23Q99PF4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Cdh23Q99PF4 Gm13181-201ENSMUST00000120117 1069 ntBASIC21■□□□□ 0.95
Cdh23Q99PF4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdh23Q99PF4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh23Q99PF4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh23Q99PF4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cdh23Q99PF4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cdh23Q99PF4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh23Q99PF4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cdh23Q99PF4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh23Q99PF4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh23Q99PF4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cdh23Q99PF4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh23Q99PF4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh23Q99PF4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh23Q99PF4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh23Q99PF4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cdh23Q99PF4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh23Q99PF4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh23Q99PF4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.97■□□□□ 0.95
Cdh23Q99PF4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cdh23Q99PF4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Gm13168-201ENSMUST00000121771 632 ntBASIC20.96■□□□□ 0.95
Cdh23Q99PF4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Mir5133-201ENSMUST00000174955 77 ntBASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh23Q99PF4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Gm13234-201ENSMUST00000120010 747 ntBASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.96■□□□□ 0.95
Cdh23Q99PF4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh23Q99PF4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh23Q99PF4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms