Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Gm22238-201ENSMUST00000175222 88 ntBASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Ubqln4Q99NB8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln4Q99NB8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln4Q99NB8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ubqln4Q99NB8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ubqln4Q99NB8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ubqln4Q99NB8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubqln4Q99NB8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubqln4Q99NB8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ubqln4Q99NB8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubqln4Q99NB8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Ubqln4Q99NB8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.33■□□□□ 0.52
Ubqln4Q99NB8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.33■□□□□ 0.52
Ubqln4Q99NB8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubqln4Q99NB8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ubqln4Q99NB8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln4Q99NB8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ubqln4Q99NB8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.3■□□□□ 0.52
Ubqln4Q99NB8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.3■□□□□ 0.52
Ubqln4Q99NB8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.3■□□□□ 0.52
Ubqln4Q99NB8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubqln4Q99NB8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.3■□□□□ 0.52
Ubqln4Q99NB8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln4Q99NB8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubqln4Q99NB8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubqln4Q99NB8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.27■□□□□ 0.52
Ubqln4Q99NB8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.27■□□□□ 0.52
Ubqln4Q99NB8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.27■□□□□ 0.52
Ubqln4Q99NB8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubqln4Q99NB8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms