Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha11Q91Y19 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha11Q91Y19 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdha11Q91Y19 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.29■■□□□ 1
Pcdha11Q91Y19 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha11Q91Y19 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdha11Q91Y19 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha11Q91Y19 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha11Q91Y19 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha11Q91Y19 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pcdha11Q91Y19 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha11Q91Y19 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdha11Q91Y19 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha11Q91Y19 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Gm15039-201ENSMUST00000118914 875 ntBASIC21.27■■□□□ 1
Pcdha11Q91Y19 Gm45417-201ENSMUST00000209533 758 ntBASIC21.27■■□□□ 1
Pcdha11Q91Y19 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha11Q91Y19 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdha11Q91Y19 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Gm43137-201ENSMUST00000198052 594 ntBASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Pcdha11Q91Y19 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha11Q91Y19 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.24■□□□□ 0.99
Pcdha11Q91Y19 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha11Q91Y19 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.22■□□□□ 0.99
Pcdha11Q91Y19 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha11Q91Y19 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha11Q91Y19 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha11Q91Y19 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.21■□□□□ 0.99
Pcdha11Q91Y19 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdha11Q91Y19 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha11Q91Y19 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha11Q91Y19 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha11Q91Y19 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdha11Q91Y19 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.19■□□□□ 0.98
Pcdha11Q91Y19 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdha11Q91Y19 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms