Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha2Q91Y17 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha2Q91Y17 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha2Q91Y17 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha2Q91Y17 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha2Q91Y17 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha2Q91Y17 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha2Q91Y17 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.66■■□□□ 1.06
Pcdha2Q91Y17 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdha2Q91Y17 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha2Q91Y17 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdha2Q91Y17 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha2Q91Y17 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.66■■□□□ 1.06
Pcdha2Q91Y17 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha2Q91Y17 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha2Q91Y17 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha2Q91Y17 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.65■■□□□ 1.06
Pcdha2Q91Y17 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha2Q91Y17 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha2Q91Y17 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha2Q91Y17 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Pcdha2Q91Y17 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha2Q91Y17 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha2Q91Y17 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha2Q91Y17 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha2Q91Y17 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha2Q91Y17 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.63■■□□□ 1.05
Pcdha2Q91Y17 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha2Q91Y17 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha2Q91Y17 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha2Q91Y17 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha2Q91Y17 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha2Q91Y17 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha2Q91Y17 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.62■■□□□ 1.05
Pcdha2Q91Y17 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha2Q91Y17 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha2Q91Y17 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha2Q91Y17 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha2Q91Y17 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha2Q91Y17 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha2Q91Y17 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha2Q91Y17 Mir6236-201ENSMUST00000184437 123 ntBASIC21.6■■□□□ 1.05
Pcdha2Q91Y17 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha2Q91Y17 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha2Q91Y17 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha2Q91Y17 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha2Q91Y17 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha2Q91Y17 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.05
Pcdha2Q91Y17 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha2Q91Y17 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
Pcdha2Q91Y17 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha2Q91Y17 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha2Q91Y17 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha2Q91Y17 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha2Q91Y17 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdha2Q91Y17 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha2Q91Y17 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms