Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhga3Q91XY5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhga3Q91XY5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhga3Q91XY5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdhga3Q91XY5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhga3Q91XY5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhga3Q91XY5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhga3Q91XY5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Pcdhga3Q91XY5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga3Q91XY5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga3Q91XY5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhga3Q91XY5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Gm7417-201ENSMUST00000192950 473 ntBASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga3Q91XY5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga3Q91XY5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhga3Q91XY5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga3Q91XY5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga3Q91XY5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Etf1-202ENSMUST00000180351 108 ntBASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga3Q91XY5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhga3Q91XY5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhga3Q91XY5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdhga3Q91XY5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga3Q91XY5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga3Q91XY5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga3Q91XY5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga3Q91XY5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga3Q91XY5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga3Q91XY5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga3Q91XY5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga3Q91XY5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga3Q91XY5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga3Q91XY5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga3Q91XY5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga3Q91XY5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms