Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga9Q91XX9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhga9Q91XX9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhga9Q91XX9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhga9Q91XX9 Golgb1-201ENSMUST00000023534 498 ntBASIC20■□□□□ 0.79
Pcdhga9Q91XX9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhga9Q91XX9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga9Q91XX9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga9Q91XX9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhga9Q91XX9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.99■□□□□ 0.79
Pcdhga9Q91XX9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
Pcdhga9Q91XX9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.99■□□□□ 0.79
Pcdhga9Q91XX9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhga9Q91XX9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhga9Q91XX9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdhga9Q91XX9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhga9Q91XX9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.98■□□□□ 0.79
Pcdhga9Q91XX9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pcdhga9Q91XX9 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.98■□□□□ 0.79
Pcdhga9Q91XX9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhga9Q91XX9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.97■□□□□ 0.79
Pcdhga9Q91XX9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga9Q91XX9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhga9Q91XX9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga9Q91XX9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga9Q91XX9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga9Q91XX9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga9Q91XX9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga9Q91XX9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga9Q91XX9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga9Q91XX9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga9Q91XX9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga9Q91XX9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga9Q91XX9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pcdhga9Q91XX9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga9Q91XX9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga9Q91XX9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga9Q91XX9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga9Q91XX9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga9Q91XX9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms