Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
StrcQ8VIM6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
StrcQ8VIM6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
StrcQ8VIM6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
StrcQ8VIM6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
StrcQ8VIM6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.86■■□□□ 1.57
StrcQ8VIM6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC24.86■■□□□ 1.57
StrcQ8VIM6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
StrcQ8VIM6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
StrcQ8VIM6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
StrcQ8VIM6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
StrcQ8VIM6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
StrcQ8VIM6 Gm9988-201ENSMUST00000069786 435 ntBASIC24.85■■□□□ 1.57
StrcQ8VIM6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.84■■□□□ 1.57
StrcQ8VIM6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
StrcQ8VIM6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC24.84■■□□□ 1.57
StrcQ8VIM6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
StrcQ8VIM6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.83■■□□□ 1.57
StrcQ8VIM6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
StrcQ8VIM6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
StrcQ8VIM6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
StrcQ8VIM6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
StrcQ8VIM6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
StrcQ8VIM6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
StrcQ8VIM6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
StrcQ8VIM6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
StrcQ8VIM6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
StrcQ8VIM6 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.81■■□□□ 1.56
StrcQ8VIM6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
StrcQ8VIM6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
StrcQ8VIM6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC24.81■■□□□ 1.56
StrcQ8VIM6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
StrcQ8VIM6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
StrcQ8VIM6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
StrcQ8VIM6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
StrcQ8VIM6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
StrcQ8VIM6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
StrcQ8VIM6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
StrcQ8VIM6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
StrcQ8VIM6 Gm27801-201ENSMUST00000184174 223 ntBASIC24.79■■□□□ 1.56
StrcQ8VIM6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC24.79■■□□□ 1.56
StrcQ8VIM6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
StrcQ8VIM6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.79■■□□□ 1.56
StrcQ8VIM6 Gm13148-201ENSMUST00000118892 745 ntBASIC24.79■■□□□ 1.56
StrcQ8VIM6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC24.79■■□□□ 1.56
StrcQ8VIM6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.79■■□□□ 1.56
StrcQ8VIM6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
StrcQ8VIM6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Gm4968-201ENSMUST00000071458 858 ntBASIC24.78■■□□□ 1.56
StrcQ8VIM6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
StrcQ8VIM6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.77■■□□□ 1.56
StrcQ8VIM6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC24.77■■□□□ 1.56
StrcQ8VIM6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
StrcQ8VIM6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
StrcQ8VIM6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC24.77■■□□□ 1.56
StrcQ8VIM6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC24.77■■□□□ 1.56
StrcQ8VIM6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.77■■□□□ 1.56
StrcQ8VIM6 Gm43859-201ENSMUST00000200075 1412 ntBASIC24.77■■□□□ 1.56
StrcQ8VIM6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
StrcQ8VIM6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
StrcQ8VIM6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
StrcQ8VIM6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
StrcQ8VIM6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
StrcQ8VIM6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
StrcQ8VIM6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
StrcQ8VIM6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.75■■□□□ 1.55
StrcQ8VIM6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
StrcQ8VIM6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
StrcQ8VIM6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
StrcQ8VIM6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
StrcQ8VIM6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.74■■□□□ 1.55
StrcQ8VIM6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
StrcQ8VIM6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
StrcQ8VIM6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
StrcQ8VIM6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
StrcQ8VIM6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
StrcQ8VIM6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
StrcQ8VIM6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms