Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40cQ8VHQ4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40cQ8VHQ4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40cQ8VHQ4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rab40cQ8VHQ4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.47■□□□□ 0.23
Rab40cQ8VHQ4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40cQ8VHQ4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40cQ8VHQ4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Gm11175-201ENSMUST00000116172 543 ntBASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40cQ8VHQ4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40cQ8VHQ4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40cQ8VHQ4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab40cQ8VHQ4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab40cQ8VHQ4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab40cQ8VHQ4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab40cQ8VHQ4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Rab40cQ8VHQ4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab40cQ8VHQ4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab40cQ8VHQ4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rab40cQ8VHQ4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab40cQ8VHQ4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab40cQ8VHQ4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab40cQ8VHQ4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab40cQ8VHQ4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms