Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip4Q8CI96 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Clip4Q8CI96 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clip4Q8CI96 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip4Q8CI96 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip4Q8CI96 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Clip4Q8CI96 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip4Q8CI96 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.24■□□□□ 0.83
Clip4Q8CI96 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.24■□□□□ 0.83
Clip4Q8CI96 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Clip4Q8CI96 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clip4Q8CI96 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip4Q8CI96 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Clip4Q8CI96 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip4Q8CI96 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip4Q8CI96 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clip4Q8CI96 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Clip4Q8CI96 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip4Q8CI96 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.21■□□□□ 0.83
Clip4Q8CI96 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Clip4Q8CI96 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Clip4Q8CI96 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip4Q8CI96 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip4Q8CI96 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clip4Q8CI96 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Clip4Q8CI96 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.19■□□□□ 0.82
Clip4Q8CI96 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip4Q8CI96 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip4Q8CI96 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip4Q8CI96 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip4Q8CI96 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clip4Q8CI96 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clip4Q8CI96 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip4Q8CI96 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip4Q8CI96 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.18■□□□□ 0.82
Clip4Q8CI96 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip4Q8CI96 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip4Q8CI96 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clip4Q8CI96 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip4Q8CI96 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip4Q8CI96 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip4Q8CI96 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clip4Q8CI96 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms