Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pabpn1Q8CCS6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pabpn1Q8CCS6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pabpn1Q8CCS6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC32.33■■■□□ 2.77
Pabpn1Q8CCS6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC32.33■■■□□ 2.77
Pabpn1Q8CCS6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Pabpn1Q8CCS6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pabpn1Q8CCS6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Pabpn1Q8CCS6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Pabpn1Q8CCS6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
Pabpn1Q8CCS6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Pabpn1Q8CCS6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pabpn1Q8CCS6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pabpn1Q8CCS6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Pabpn1Q8CCS6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pabpn1Q8CCS6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC32.3■■■□□ 2.76
Pabpn1Q8CCS6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Pabpn1Q8CCS6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC32.3■■■□□ 2.76
Pabpn1Q8CCS6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC32.3■■■□□ 2.76
Pabpn1Q8CCS6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pabpn1Q8CCS6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC32.3■■■□□ 2.76
Pabpn1Q8CCS6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Pabpn1Q8CCS6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Pabpn1Q8CCS6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Pabpn1Q8CCS6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
Pabpn1Q8CCS6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC32.29■■■□□ 2.76
Pabpn1Q8CCS6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Pabpn1Q8CCS6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC32.29■■■□□ 2.76
Pabpn1Q8CCS6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Pabpn1Q8CCS6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Pabpn1Q8CCS6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pabpn1Q8CCS6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pabpn1Q8CCS6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
Pabpn1Q8CCS6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC32.27■■■□□ 2.76
Pabpn1Q8CCS6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC32.27■■■□□ 2.76
Pabpn1Q8CCS6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Pabpn1Q8CCS6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Pabpn1Q8CCS6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC32.26■■■□□ 2.76
Pabpn1Q8CCS6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC32.26■■■□□ 2.75
Pabpn1Q8CCS6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Pabpn1Q8CCS6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pabpn1Q8CCS6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Pabpn1Q8CCS6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Pabpn1Q8CCS6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Pabpn1Q8CCS6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Pabpn1Q8CCS6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pabpn1Q8CCS6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pabpn1Q8CCS6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pabpn1Q8CCS6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Pabpn1Q8CCS6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Pabpn1Q8CCS6 Gm6365-201ENSMUST00000054711 744 ntBASIC32.24■■■□□ 2.75
Pabpn1Q8CCS6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pabpn1Q8CCS6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pabpn1Q8CCS6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC32.23■■■□□ 2.75
Pabpn1Q8CCS6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pabpn1Q8CCS6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC32.23■■■□□ 2.75
Pabpn1Q8CCS6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Pabpn1Q8CCS6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Pabpn1Q8CCS6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pabpn1Q8CCS6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Pabpn1Q8CCS6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
Pabpn1Q8CCS6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC32.22■■■□□ 2.75
Pabpn1Q8CCS6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pabpn1Q8CCS6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Pabpn1Q8CCS6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pabpn1Q8CCS6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Pabpn1Q8CCS6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Pabpn1Q8CCS6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pabpn1Q8CCS6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Pabpn1Q8CCS6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Pabpn1Q8CCS6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pabpn1Q8CCS6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pabpn1Q8CCS6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pabpn1Q8CCS6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pabpn1Q8CCS6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pabpn1Q8CCS6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC32.19■■■□□ 2.74
Pabpn1Q8CCS6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC32.18■■■□□ 2.74
Pabpn1Q8CCS6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
Pabpn1Q8CCS6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pabpn1Q8CCS6 Gm6576-201ENSMUST00000169678 883 ntBASIC32.17■■■□□ 2.74
Pabpn1Q8CCS6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pabpn1Q8CCS6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Pabpn1Q8CCS6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
Pabpn1Q8CCS6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Pabpn1Q8CCS6 Gm42699-201ENSMUST00000198104 1657 ntBASIC32.15■■■□□ 2.74
Pabpn1Q8CCS6 Gm11643-201ENSMUST00000119578 864 ntBASIC32.15■■■□□ 2.74
Pabpn1Q8CCS6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pabpn1Q8CCS6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pabpn1Q8CCS6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pabpn1Q8CCS6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pabpn1Q8CCS6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms