Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd9Q8BYH8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Gm37856-201ENSMUST00000191634 999 ntBASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd9Q8BYH8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Gm20049-201ENSMUST00000219950 730 ntBASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd9Q8BYH8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.18■□□□□ 0.18
Chd9Q8BYH8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chd9Q8BYH8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd9Q8BYH8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Gm13148-201ENSMUST00000118892 745 ntBASIC16.15■□□□□ 0.18
Chd9Q8BYH8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd9Q8BYH8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chd9Q8BYH8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Gm27741-201ENSMUST00000185060 237 ntBASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd9Q8BYH8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms