Protein–RNA interactions for Protein: Q8BUE1

Slc9a4, Sodium/hydrogen exchanger 4, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a4Q8BUE1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc9a4Q8BUE1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Slc9a4Q8BUE1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a4Q8BUE1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a4Q8BUE1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a4Q8BUE1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a4Q8BUE1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a4Q8BUE1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a4Q8BUE1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a4Q8BUE1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a4Q8BUE1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a4Q8BUE1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a4Q8BUE1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a4Q8BUE1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a4Q8BUE1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a4Q8BUE1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc9a4Q8BUE1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc9a4Q8BUE1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.18■□□□□ 0.98
Slc9a4Q8BUE1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc9a4Q8BUE1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Slc9a4Q8BUE1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc9a4Q8BUE1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a4Q8BUE1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc9a4Q8BUE1 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.16■□□□□ 0.98
Slc9a4Q8BUE1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc9a4Q8BUE1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc9a4Q8BUE1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc9a4Q8BUE1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc9a4Q8BUE1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a4Q8BUE1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a4Q8BUE1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a4Q8BUE1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a4Q8BUE1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a4Q8BUE1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a4Q8BUE1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a4Q8BUE1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a4Q8BUE1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc9a4Q8BUE1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.14■□□□□ 0.97
Slc9a4Q8BUE1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc9a4Q8BUE1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc9a4Q8BUE1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc9a4Q8BUE1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc9a4Q8BUE1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.13■□□□□ 0.97
Slc9a4Q8BUE1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a4Q8BUE1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a4Q8BUE1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Slc9a4Q8BUE1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Slc9a4Q8BUE1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.12■□□□□ 0.97
Slc9a4Q8BUE1 Gm13241-201ENSMUST00000094493 780 ntBASIC21.12■□□□□ 0.97
Slc9a4Q8BUE1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a4Q8BUE1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a4Q8BUE1 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.11■□□□□ 0.97
Slc9a4Q8BUE1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Slc9a4Q8BUE1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a4Q8BUE1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a4Q8BUE1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a4Q8BUE1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a4Q8BUE1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a4Q8BUE1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Gm21956-201ENSMUST00000179946 522 ntBASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Mir6236-201ENSMUST00000184437 123 ntBASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a4Q8BUE1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a4Q8BUE1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms