Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Tubgcp5Q8BKN5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tubgcp5Q8BKN5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.08■□□□□ 0.81
Tubgcp5Q8BKN5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tubgcp5Q8BKN5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.08■□□□□ 0.81
Tubgcp5Q8BKN5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubgcp5Q8BKN5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubgcp5Q8BKN5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubgcp5Q8BKN5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Tubgcp5Q8BKN5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubgcp5Q8BKN5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp5Q8BKN5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.07■□□□□ 0.8
Tubgcp5Q8BKN5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp5Q8BKN5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp5Q8BKN5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp5Q8BKN5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tubgcp5Q8BKN5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp5Q8BKN5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp5Q8BKN5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.04■□□□□ 0.8
Tubgcp5Q8BKN5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tubgcp5Q8BKN5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tubgcp5Q8BKN5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Tubgcp5Q8BKN5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubgcp5Q8BKN5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubgcp5Q8BKN5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubgcp5Q8BKN5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tubgcp5Q8BKN5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tubgcp5Q8BKN5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tubgcp5Q8BKN5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tubgcp5Q8BKN5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tubgcp5Q8BKN5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Gm43566-201ENSMUST00000196851 808 ntBASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubgcp5Q8BKN5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Tubgcp5Q8BKN5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tubgcp5Q8BKN5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms