Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp2bQ8BJF9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp2bQ8BJF9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2bQ8BJF9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2bQ8BJF9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2bQ8BJF9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2bQ8BJF9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp2bQ8BJF9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.65■□□□□ 0.9
Chmp2bQ8BJF9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Chmp2bQ8BJF9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp2bQ8BJF9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Chmp2bQ8BJF9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Chmp2bQ8BJF9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.63■□□□□ 0.89
Chmp2bQ8BJF9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2bQ8BJF9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2bQ8BJF9 Gm13238-201ENSMUST00000117655 780 ntBASIC20.63■□□□□ 0.89
Chmp2bQ8BJF9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Chmp2bQ8BJF9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2bQ8BJF9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2bQ8BJF9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2bQ8BJF9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2bQ8BJF9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2bQ8BJF9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2bQ8BJF9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Chmp2bQ8BJF9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2bQ8BJF9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2bQ8BJF9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2bQ8BJF9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.59■□□□□ 0.89
Chmp2bQ8BJF9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2bQ8BJF9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2bQ8BJF9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.59■□□□□ 0.89
Chmp2bQ8BJF9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2bQ8BJF9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2bQ8BJF9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Chmp2bQ8BJF9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Chmp2bQ8BJF9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Chmp2bQ8BJF9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp2bQ8BJF9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp2bQ8BJF9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.58■□□□□ 0.89
Chmp2bQ8BJF9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp2bQ8BJF9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp2bQ8BJF9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp2bQ8BJF9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp2bQ8BJF9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.58■□□□□ 0.88
Chmp2bQ8BJF9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Chmp2bQ8BJF9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Chmp2bQ8BJF9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp2bQ8BJF9 Golph3-202ENSMUST00000226517 2359 ntBASIC20.58■□□□□ 0.88
Chmp2bQ8BJF9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2bQ8BJF9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2bQ8BJF9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2bQ8BJF9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2bQ8BJF9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2bQ8BJF9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2bQ8BJF9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2bQ8BJF9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2bQ8BJF9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms