Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn34b3Q80ZS5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn34b3Q80ZS5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn34b3Q80ZS5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn34b3Q80ZS5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cldn34b3Q80ZS5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cldn34b3Q80ZS5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Gm43530-201ENSMUST00000195920 274 ntBASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cldn34b3Q80ZS5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn34b3Q80ZS5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cldn34b3Q80ZS5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn34b3Q80ZS5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn34b3Q80ZS5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn34b3Q80ZS5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cldn34b3Q80ZS5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn34b3Q80ZS5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn34b3Q80ZS5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.76■□□□□ 0.59
Cldn34b3Q80ZS5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn34b3Q80ZS5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn34b3Q80ZS5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn34b3Q80ZS5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms