Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim62Q80V85 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim62Q80V85 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim62Q80V85 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim62Q80V85 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim62Q80V85 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim62Q80V85 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim62Q80V85 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim62Q80V85 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim62Q80V85 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim62Q80V85 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim62Q80V85 Mir6236-201ENSMUST00000184437 123 ntBASIC20.96■□□□□ 0.95
Trim62Q80V85 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim62Q80V85 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim62Q80V85 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim62Q80V85 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim62Q80V85 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim62Q80V85 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim62Q80V85 Gm21956-201ENSMUST00000179946 522 ntBASIC20.95■□□□□ 0.94
Trim62Q80V85 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim62Q80V85 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Trim62Q80V85 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Trim62Q80V85 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim62Q80V85 Gm12821-201ENSMUST00000120022 600 ntBASIC20.94■□□□□ 0.94
Trim62Q80V85 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim62Q80V85 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim62Q80V85 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.94■□□□□ 0.94
Trim62Q80V85 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim62Q80V85 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.94■□□□□ 0.94
Trim62Q80V85 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim62Q80V85 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim62Q80V85 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim62Q80V85 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim62Q80V85 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim62Q80V85 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.93■□□□□ 0.94
Trim62Q80V85 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim62Q80V85 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.93■□□□□ 0.94
Trim62Q80V85 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim62Q80V85 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim62Q80V85 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim62Q80V85 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim62Q80V85 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim62Q80V85 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim62Q80V85 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim62Q80V85 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.92■□□□□ 0.94
Trim62Q80V85 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim62Q80V85 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim62Q80V85 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim62Q80V85 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.91■□□□□ 0.94
Trim62Q80V85 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim62Q80V85 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim62Q80V85 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim62Q80V85 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.9■□□□□ 0.94
Trim62Q80V85 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim62Q80V85 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim62Q80V85 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim62Q80V85 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim62Q80V85 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim62Q80V85 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim62Q80V85 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim62Q80V85 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim62Q80V85 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.89■□□□□ 0.94
Trim62Q80V85 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim62Q80V85 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim62Q80V85 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim62Q80V85 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim62Q80V85 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trim62Q80V85 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim62Q80V85 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim62Q80V85 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim62Q80V85 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim62Q80V85 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim62Q80V85 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim62Q80V85 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.89■□□□□ 0.93
Trim62Q80V85 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim62Q80V85 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trim62Q80V85 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim62Q80V85 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim62Q80V85 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim62Q80V85 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.88■□□□□ 0.93
Trim62Q80V85 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim62Q80V85 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Trim62Q80V85 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms