Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.28■□□□□ 0.68
Prune2Q52KR3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Prune2Q52KR3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.28■□□□□ 0.68
Prune2Q52KR3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prune2Q52KR3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prune2Q52KR3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prune2Q52KR3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prune2Q52KR3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.27■□□□□ 0.67
Prune2Q52KR3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.26■□□□□ 0.67
Prune2Q52KR3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prune2Q52KR3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.26■□□□□ 0.67
Prune2Q52KR3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prune2Q52KR3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prune2Q52KR3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prune2Q52KR3 Mir5133-201ENSMUST00000174955 77 ntBASIC19.25■□□□□ 0.67
Prune2Q52KR3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.25■□□□□ 0.67
Prune2Q52KR3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Prune2Q52KR3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prune2Q52KR3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prune2Q52KR3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.25■□□□□ 0.67
Prune2Q52KR3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prune2Q52KR3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prune2Q52KR3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prune2Q52KR3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.24■□□□□ 0.67
Prune2Q52KR3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prune2Q52KR3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.23■□□□□ 0.67
Prune2Q52KR3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prune2Q52KR3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prune2Q52KR3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prune2Q52KR3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prune2Q52KR3 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.22■□□□□ 0.67
Prune2Q52KR3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prune2Q52KR3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prune2Q52KR3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prune2Q52KR3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prune2Q52KR3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Prune2Q52KR3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Gm13234-201ENSMUST00000120010 747 ntBASIC19.21■□□□□ 0.67
Prune2Q52KR3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Mir6982-201ENSMUST00000184354 68 ntBASIC19.21■□□□□ 0.67
Prune2Q52KR3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prune2Q52KR3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Prune2Q52KR3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Prune2Q52KR3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.2■□□□□ 0.66
Prune2Q52KR3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prune2Q52KR3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.19■□□□□ 0.66
Prune2Q52KR3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prune2Q52KR3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prune2Q52KR3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prune2Q52KR3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prune2Q52KR3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prune2Q52KR3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prune2Q52KR3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prune2Q52KR3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.18■□□□□ 0.66
Prune2Q52KR3 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.18■□□□□ 0.66
Prune2Q52KR3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prune2Q52KR3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prune2Q52KR3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prune2Q52KR3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prune2Q52KR3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.17■□□□□ 0.66
Prune2Q52KR3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Prune2Q52KR3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prune2Q52KR3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.17■□□□□ 0.66
Prune2Q52KR3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prune2Q52KR3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prune2Q52KR3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms