Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Q3U1D9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q3U1D9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3U1D9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.59■□□□□ 0.41
Q3U1D9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3U1D9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.59■□□□□ 0.41
Q3U1D9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Q3U1D9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3U1D9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3U1D9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3U1D9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3U1D9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3U1D9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3U1D9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.58■□□□□ 0.4
Q3U1D9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3U1D9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Q3U1D9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3U1D9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Q3U1D9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.58■□□□□ 0.4
Q3U1D9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3U1D9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Q3U1D9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q3U1D9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3U1D9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3U1D9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3U1D9 Spcs1-204ENSMUST00000226782 949 ntBASIC17.57■□□□□ 0.4
Q3U1D9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Q3U1D9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3U1D9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3U1D9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Q3U1D9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3U1D9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3U1D9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3U1D9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q3U1D9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q3U1D9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.56■□□□□ 0.4
Q3U1D9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Q3U1D9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3U1D9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3U1D9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Q3U1D9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3U1D9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.55■□□□□ 0.4
Q3U1D9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.55■□□□□ 0.4
Q3U1D9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3U1D9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Q3U1D9 Gm43173-201ENSMUST00000202246 593 ntBASIC17.54■□□□□ 0.4
Q3U1D9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3U1D9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.54■□□□□ 0.4
Q3U1D9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q3U1D9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Q3U1D9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Q3U1D9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3U1D9 Gm12251-201ENSMUST00000117893 792 ntBASIC17.53■□□□□ 0.4
Q3U1D9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3U1D9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Q3U1D9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Q3U1D9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q3U1D9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3U1D9 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.53■□□□□ 0.4
Q3U1D9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q3U1D9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q3U1D9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Q3U1D9 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.52■□□□□ 0.4
Q3U1D9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Q3U1D9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3U1D9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Q3U1D9 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.52■□□□□ 0.4
Q3U1D9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.52■□□□□ 0.4
Q3U1D9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
Q3U1D9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3U1D9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Q3U1D9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3U1D9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3U1D9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q3U1D9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q3U1D9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q3U1D9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q3U1D9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q3U1D9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Q3U1D9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3U1D9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3U1D9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Q3U1D9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q3U1D9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3U1D9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3U1D9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3U1D9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3U1D9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3U1D9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3U1D9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Q3U1D9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3U1D9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3U1D9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3U1D9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Q3U1D9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3U1D9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3U1D9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Q3U1D9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Q3U1D9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3U1D9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms