Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm29257-201ENSMUST00000186115 639 ntBASIC20.45■□□□□ 0.86
Ebf1Q07802 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.45■□□□□ 0.86
Ebf1Q07802 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ebf1Q07802 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ebf1Q07802 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.45■□□□□ 0.86
Ebf1Q07802 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ebf1Q07802 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ebf1Q07802 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ebf1Q07802 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Ebf1Q07802 Gm12251-201ENSMUST00000117893 792 ntBASIC20.44■□□□□ 0.86
Ebf1Q07802 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Ebf1Q07802 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ebf1Q07802 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.43■□□□□ 0.86
Ebf1Q07802 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.43■□□□□ 0.86
Ebf1Q07802 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.43■□□□□ 0.86
Ebf1Q07802 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf1Q07802 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.42■□□□□ 0.86
Ebf1Q07802 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf1Q07802 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf1Q07802 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ebf1Q07802 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf1Q07802 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ebf1Q07802 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf1Q07802 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf1Q07802 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ebf1Q07802 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf1Q07802 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf1Q07802 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.42■□□□□ 0.86
Ebf1Q07802 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ebf1Q07802 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf1Q07802 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Ebf1Q07802 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Ebf1Q07802 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ebf1Q07802 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ebf1Q07802 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ebf1Q07802 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ebf1Q07802 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ebf1Q07802 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.41■□□□□ 0.86
Ebf1Q07802 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ebf1Q07802 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ebf1Q07802 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ebf1Q07802 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ebf1Q07802 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ebf1Q07802 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ebf1Q07802 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.4■□□□□ 0.86
Ebf1Q07802 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ebf1Q07802 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ebf1Q07802 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ebf1Q07802 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ebf1Q07802 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ebf1Q07802 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ebf1Q07802 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ebf1Q07802 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf1Q07802 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.38■□□□□ 0.85
Ebf1Q07802 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
Ebf1Q07802 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ebf1Q07802 Gm26833-201ENSMUST00000180899 440 ntBASIC20.38■□□□□ 0.85
Ebf1Q07802 Gm7291-201ENSMUST00000199147 382 ntBASIC20.38■□□□□ 0.85
Ebf1Q07802 Spcs1-204ENSMUST00000226782 949 ntBASIC20.38■□□□□ 0.85
Ebf1Q07802 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Ebf1Q07802 Gm10493-201ENSMUST00000097270 612 ntBASIC20.38■□□□□ 0.85
Ebf1Q07802 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf1Q07802 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ebf1Q07802 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.37■□□□□ 0.85
Ebf1Q07802 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.37■□□□□ 0.85
Ebf1Q07802 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf1Q07802 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf1Q07802 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf1Q07802 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf1Q07802 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.37■□□□□ 0.85
Ebf1Q07802 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.36■□□□□ 0.85
Ebf1Q07802 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
Ebf1Q07802 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ebf1Q07802 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf1Q07802 Gm43530-201ENSMUST00000195920 274 ntBASIC20.36■□□□□ 0.85
Ebf1Q07802 Gm43060-201ENSMUST00000200621 289 ntBASIC20.36■□□□□ 0.85
Ebf1Q07802 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf1Q07802 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf1Q07802 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf1Q07802 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf1Q07802 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf1Q07802 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf1Q07802 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf1Q07802 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.35■□□□□ 0.85
Ebf1Q07802 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf1Q07802 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ebf1Q07802 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf1Q07802 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf1Q07802 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.34■□□□□ 0.85
Ebf1Q07802 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms