Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brca2P97929 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Brca2P97929 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brca2P97929 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Brca2P97929 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brca2P97929 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Brca2P97929 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.88■□□□□ 0.77
Brca2P97929 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca2P97929 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.87■□□□□ 0.77
Brca2P97929 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca2P97929 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca2P97929 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brca2P97929 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca2P97929 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca2P97929 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca2P97929 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca2P97929 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca2P97929 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Brca2P97929 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca2P97929 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca2P97929 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Brca2P97929 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca2P97929 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Brca2P97929 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Brca2P97929 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca2P97929 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca2P97929 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.85■□□□□ 0.77
Brca2P97929 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca2P97929 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.84■□□□□ 0.77
Brca2P97929 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Brca2P97929 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.84■□□□□ 0.77
Brca2P97929 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca2P97929 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brca2P97929 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brca2P97929 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.83■□□□□ 0.77
Brca2P97929 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brca2P97929 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brca2P97929 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brca2P97929 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.83■□□□□ 0.76
Brca2P97929 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brca2P97929 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Brca2P97929 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.82■□□□□ 0.76
Brca2P97929 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.82■□□□□ 0.76
Brca2P97929 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Brca2P97929 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca2P97929 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Brca2P97929 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brca2P97929 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brca2P97929 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brca2P97929 Gm13148-201ENSMUST00000118892 745 ntBASIC19.81■□□□□ 0.76
Brca2P97929 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.81■□□□□ 0.76
Brca2P97929 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Brca2P97929 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca2P97929 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca2P97929 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca2P97929 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Brca2P97929 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.8■□□□□ 0.76
Brca2P97929 Gm43530-201ENSMUST00000195920 274 ntBASIC19.8■□□□□ 0.76
Brca2P97929 Gm7143-201ENSMUST00000222811 859 ntBASIC19.8■□□□□ 0.76
Brca2P97929 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca2P97929 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.8■□□□□ 0.76
Brca2P97929 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca2P97929 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca2P97929 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.79■□□□□ 0.76
Brca2P97929 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.79■□□□□ 0.76
Brca2P97929 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca2P97929 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Brca2P97929 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Brca2P97929 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.79■□□□□ 0.76
Brca2P97929 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca2P97929 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brca2P97929 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.78■□□□□ 0.76
Brca2P97929 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.78■□□□□ 0.76
Brca2P97929 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Brca2P97929 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Brca2P97929 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca2P97929 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Brca2P97929 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca2P97929 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brca2P97929 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brca2P97929 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brca2P97929 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.77■□□□□ 0.76
Brca2P97929 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Brca2P97929 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms