Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lsm5P62322 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm5P62322 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Lsm5P62322 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.84■□□□□ 0.29
Lsm5P62322 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm5P62322 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm5P62322 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
Lsm5P62322 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm5P62322 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lsm5P62322 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm5P62322 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm5P62322 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.83■□□□□ 0.28
Lsm5P62322 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.83■□□□□ 0.28
Lsm5P62322 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm5P62322 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm5P62322 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm5P62322 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm5P62322 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.82■□□□□ 0.28
Lsm5P62322 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lsm5P62322 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lsm5P62322 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm5P62322 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm5P62322 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Lsm5P62322 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.82■□□□□ 0.28
Lsm5P62322 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Lsm5P62322 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lsm5P62322 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.81■□□□□ 0.28
Lsm5P62322 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.81■□□□□ 0.28
Lsm5P62322 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.81■□□□□ 0.28
Lsm5P62322 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm5P62322 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lsm5P62322 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.8■□□□□ 0.28
Lsm5P62322 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lsm5P62322 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.8■□□□□ 0.28
Lsm5P62322 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm5P62322 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm5P62322 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm5P62322 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm5P62322 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Lsm5P62322 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm5P62322 Gm11599-201ENSMUST00000118720 878 ntBASIC16.79■□□□□ 0.28
Lsm5P62322 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.79■□□□□ 0.28
Lsm5P62322 Gm7432-201ENSMUST00000210343 879 ntBASIC16.79■□□□□ 0.28
Lsm5P62322 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm5P62322 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm5P62322 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lsm5P62322 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm5P62322 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm5P62322 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm5P62322 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm5P62322 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm5P62322 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm5P62322 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lsm5P62322 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.77■□□□□ 0.28
Lsm5P62322 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms