Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Yme1l1O88967 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Yme1l1O88967 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Yme1l1O88967 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Yme1l1O88967 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Yme1l1O88967 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Yme1l1O88967 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Yme1l1O88967 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Yme1l1O88967 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Yme1l1O88967 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.29■■□□□ 1
Yme1l1O88967 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Yme1l1O88967 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.29■■□□□ 1
Yme1l1O88967 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.29■■□□□ 1
Yme1l1O88967 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.29■■□□□ 1
Yme1l1O88967 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.29■■□□□ 1
Yme1l1O88967 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Yme1l1O88967 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Yme1l1O88967 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.28■■□□□ 1
Yme1l1O88967 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.28■■□□□ 1
Yme1l1O88967 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.28■■□□□ 1
Yme1l1O88967 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Yme1l1O88967 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.28■■□□□ 1
Yme1l1O88967 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Yme1l1O88967 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Yme1l1O88967 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Yme1l1O88967 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.27■■□□□ 1
Yme1l1O88967 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Yme1l1O88967 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.27■■□□□ 1
Yme1l1O88967 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Yme1l1O88967 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Yme1l1O88967 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Yme1l1O88967 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Yme1l1O88967 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Yme1l1O88967 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Yme1l1O88967 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Yme1l1O88967 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Yme1l1O88967 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.25■□□□□ 0.99
Yme1l1O88967 Gm10602-201ENSMUST00000098239 609 ntBASIC21.25■□□□□ 0.99
Yme1l1O88967 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Yme1l1O88967 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Yme1l1O88967 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Yme1l1O88967 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Yme1l1O88967 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Yme1l1O88967 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Yme1l1O88967 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Yme1l1O88967 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Yme1l1O88967 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.23■□□□□ 0.99
Yme1l1O88967 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.23■□□□□ 0.99
Yme1l1O88967 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.23■□□□□ 0.99
Yme1l1O88967 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.23■□□□□ 0.99
Yme1l1O88967 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Yme1l1O88967 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Yme1l1O88967 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Yme1l1O88967 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Yme1l1O88967 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Yme1l1O88967 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Yme1l1O88967 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Yme1l1O88967 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Yme1l1O88967 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.22■□□□□ 0.99
Yme1l1O88967 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Yme1l1O88967 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Yme1l1O88967 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Yme1l1O88967 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Yme1l1O88967 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Yme1l1O88967 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Yme1l1O88967 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Yme1l1O88967 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Yme1l1O88967 Gm9988-201ENSMUST00000069786 435 ntBASIC21.21■□□□□ 0.99
Yme1l1O88967 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.21■□□□□ 0.99
Yme1l1O88967 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Yme1l1O88967 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Yme1l1O88967 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.21■□□□□ 0.99
Yme1l1O88967 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Yme1l1O88967 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Yme1l1O88967 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Yme1l1O88967 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.2■□□□□ 0.98
Yme1l1O88967 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.2■□□□□ 0.98
Yme1l1O88967 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Yme1l1O88967 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Yme1l1O88967 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Yme1l1O88967 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.2■□□□□ 0.98
Yme1l1O88967 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Yme1l1O88967 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Yme1l1O88967 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Yme1l1O88967 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Yme1l1O88967 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Yme1l1O88967 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Yme1l1O88967 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.19■□□□□ 0.98
Yme1l1O88967 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Yme1l1O88967 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms