Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cops4O88544 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cops4O88544 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.61■□□□□ 0.57
Cops4O88544 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.61■□□□□ 0.57
Cops4O88544 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops4O88544 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops4O88544 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops4O88544 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops4O88544 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops4O88544 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops4O88544 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cops4O88544 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.6■□□□□ 0.57
Cops4O88544 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.6■□□□□ 0.57
Cops4O88544 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cops4O88544 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops4O88544 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops4O88544 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops4O88544 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.59■□□□□ 0.57
Cops4O88544 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cops4O88544 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.59■□□□□ 0.57
Cops4O88544 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cops4O88544 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Cops4O88544 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.58■□□□□ 0.57
Cops4O88544 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cops4O88544 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cops4O88544 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cops4O88544 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cops4O88544 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Cops4O88544 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cops4O88544 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cops4O88544 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cops4O88544 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cops4O88544 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cops4O88544 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cops4O88544 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cops4O88544 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.57■□□□□ 0.56
Cops4O88544 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cops4O88544 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops4O88544 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cops4O88544 Gm10420-201ENSMUST00000121713 882 ntBASIC18.56■□□□□ 0.56
Cops4O88544 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops4O88544 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops4O88544 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cops4O88544 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops4O88544 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops4O88544 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Cops4O88544 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops4O88544 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops4O88544 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.55■□□□□ 0.56
Cops4O88544 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops4O88544 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops4O88544 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops4O88544 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.55■□□□□ 0.56
Cops4O88544 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops4O88544 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops4O88544 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cops4O88544 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cops4O88544 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.55■□□□□ 0.56
Cops4O88544 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops4O88544 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.55■□□□□ 0.56
Cops4O88544 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.54■□□□□ 0.56
Cops4O88544 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.54■□□□□ 0.56
Cops4O88544 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.54■□□□□ 0.56
Cops4O88544 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Cops4O88544 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops4O88544 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cops4O88544 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops4O88544 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops4O88544 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cops4O88544 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops4O88544 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops4O88544 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops4O88544 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.52■□□□□ 0.56
Cops4O88544 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops4O88544 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cops4O88544 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops4O88544 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cops4O88544 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cops4O88544 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cops4O88544 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.51■□□□□ 0.55
Cops4O88544 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cops4O88544 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.51■□□□□ 0.55
Cops4O88544 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cops4O88544 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops4O88544 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms